Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

Download FIRM

Citation

Genes Targeted by hsa-mir-548c-3p in MUC Ovarian Hendrix Cluster 25 Table contains all genes in the MUC Ovarian Hendrix cluster number 25. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-548c-3p 56981 PRDM11 PR domain containing 11 [Source:HGNC Symbol;Acc:13996] zzz999 9692 KIAA0391 KIAA0391 [Source:HGNC Symbol;Acc:19958] T 1365 CLDN3 claudin 3 [Source:HGNC Symbol;Acc:2045] zzz999 1783 DYNC1LI2 dynein, cytoplasmic 1, light intermediate chain 2 [Source:HGNC Symbol;Acc:2966] P T 4157 zzz999 zzz999 zzz999 51128 SAR1B SAR1 homolog B (S. cerevisiae) [Source:HGNC Symbol;Acc:10535] zzz999 55252 ASXL2 additional sex combs like 2 (Drosophila) [Source:HGNC Symbol;Acc:23805] P T 80344 DCAF11 DDB1 and CUL4 associated factor 11 [Source:HGNC Symbol;Acc:20258] zzz999 382 ARF6 ADP-ribosylation factor 6 [Source:HGNC Symbol;Acc:659] P T 133619 PRRC1 proline-rich coiled-coil 1 [Source:HGNC Symbol;Acc:28164] T 4698 NDUFA5 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa [Source:HGNC Symbol;Acc:7688] zzz999 5630 PRPH peripherin [Source:HGNC Symbol;Acc:9461] zzz999 10842 C7orf16 chromosome 7 open reading frame 16 [Source:HGNC Symbol;Acc:16973] T 3895 KTN1 kinectin 1 (kinesin receptor) [Source:HGNC Symbol;Acc:6467] zzz999 10970 CKAP4 cytoskeleton-associated protein 4 [Source:HGNC Symbol;Acc:16991] T 7328 UBE2H ubiquitin-conjugating enzyme E2H (UBC8 homolog, yeast) [Source:HGNC Symbol;Acc:12484] P T 55157 DARS2 aspartyl-tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:25538] T 29123 ANKRD11 ankyrin repeat domain 11 [Source:HGNC Symbol;Acc:21316] T 5514 PPP1R10 protein phosphatase 1, regulatory (inhibitor) subunit 10 [Source:HGNC Symbol;Acc:9284] zzz999 2821 GPI glucose-6-phosphate isomerase [Source:HGNC Symbol;Acc:4458] zzz999 8128 ST8SIA2 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:HGNC Symbol;Acc:10870] zzz999 3842 TNPO1 transportin 1 [Source:HGNC Symbol;Acc:6401] P T 4151 MB myoglobin [Source:HGNC Symbol;Acc:6915] zzz999 859 CAV3 caveolin 3 [Source:HGNC Symbol;Acc:1529] zzz999 9047 SH2D2A SH2 domain containing 2A [Source:HGNC Symbol;Acc:10821] zzz999 8343 HIST1H2BI histone cluster 1, H2bi [Source:HGNC Symbol;Acc:4756] zzz999 9914 ATP2C2 ATPase, Ca++ transporting, type 2C, member 2 [Source:HGNC Symbol;Acc:29103] P T 9402 GRAP2 GRB2-related adaptor protein 2 [Source:HGNC Symbol;Acc:4563] zzz999 3839 KPNA3 karyopherin alpha 3 (importin alpha 4) [Source:HGNC Symbol;Acc:6396] P T 1641 DCX doublecortin [Source:HGNC Symbol;Acc:2714] P T 3181 HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:HGNC Symbol;Acc:5033] P T 6741 SSB Sjogren syndrome antigen B (autoantigen La) [Source:HGNC Symbol;Acc:11316] zzz999 8355 HIST1H3J histone cluster 1, H3j [Source:HGNC Symbol;Acc:4774] zzz999 9518 GDF15 growth differentiation factor 15 [Source:HGNC Symbol;Acc:30142] zzz999 840 CASP7 caspase 7, apoptosis-related cysteine peptidase [Source:HGNC Symbol;Acc:1508] T 10383 TUBB2C tubulin, beta 2C [Source:HGNC Symbol;Acc:20771] zzz999 6491 STIL SCL/TAL1 interrupting locus [Source:HGNC Symbol;Acc:10879] T 3309 HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) [Source:HGNC Symbol;Acc:5238] T 9731 CEP104 centrosomal protein 104kDa [Source:HGNC Symbol;Acc:24866] zzz999 10725 NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive [Source:HGNC Symbol;Acc:7774] T 10066 SCAMP2 secretory carrier membrane protein 2 [Source:HGNC Symbol;Acc:10564] zzz999 50848 F11R F11 receptor [Source:HGNC Symbol;Acc:14685] P T 81609 SNX27 sorting nexin family member 27 [Source:HGNC Symbol;Acc:20073] T 9371 KIF3B kinesin family member 3B [Source:HGNC Symbol;Acc:6320] zzz999 64065 PERP PERP, TP53 apoptosis effector [Source:HGNC Symbol;Acc:17637] T 27297 CRCP CGRP receptor component [Source:HGNC Symbol;Acc:17888] T 64746 ACBD3 acyl-CoA binding domain containing 3 [Source:HGNC Symbol;Acc:15453] P T 1238 CCBP2 chemokine binding protein 2 [Source:HGNC Symbol;Acc:1565] T 51278 IER5 immediate early response 5 [Source:HGNC Symbol;Acc:5393] P T 6674 SPAG1 sperm associated antigen 1 [Source:HGNC Symbol;Acc:11212] zzz999 54503 ZDHHC13 zinc finger, DHHC-type containing 13 [Source:HGNC Symbol;Acc:18413] zzz999 9761 MLEC malectin [Source:HGNC Symbol;Acc:28973] T 2643 GCH1 GTP cyclohydrolase 1 [Source:HGNC Symbol;Acc:4193] T 9772 KIAA0195 KIAA0195 [Source:HGNC Symbol;Acc:28983] zzz999 26266 SLC13A4 solute carrier family 13 (sodium/sulfate symporters), member 4 [Source:HGNC Symbol;Acc:15827] zzz999 673 BRAF v-raf murine sarcoma viral oncogene homolog B1 [Source:HGNC Symbol;Acc:1097] zzz999 55775 TDP1 tyrosyl-DNA phosphodiesterase 1 [Source:HGNC Symbol;Acc:18884] T 26512 INTS6 integrator complex subunit 6 [Source:HGNC Symbol;Acc:14879] P T 7150 TOP1 topoisomerase (DNA) I [Source:HGNC Symbol;Acc:11986] T 51241 COX16 COX16 cytochrome c oxidase assembly homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:20213] zzz999 94239 H2AFV H2A histone family, member V [Source:HGNC Symbol;Acc:20664] T 2932 GSK3B glycogen synthase kinase 3 beta [Source:HGNC Symbol;Acc:4617] zzz999 8336 HIST1H2AM histone cluster 1, H2am [Source:HGNC Symbol;Acc:4735] zzz999 7178 TPT1 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:12022] zzz999 23303 KIF13B kinesin family member 13B [Source:HGNC Symbol;Acc:14405] zzz999 824 CAPN2 calpain 2, (m/II) large subunit [Source:HGNC Symbol;Acc:1479] zzz999 5581 PRKCE protein kinase C, epsilon [Source:HGNC Symbol;Acc:9401] P T 79977 GRHL2 grainyhead-like 2 (Drosophila) [Source:HGNC Symbol;Acc:2799] zzz999 5911 RAP2A RAP2A, member of RAS oncogene family [Source:HGNC Symbol;Acc:9861] T 64083 GOLPH3 golgi phosphoprotein 3 (coat-protein) [Source:HGNC Symbol;Acc:15452] P T 7319 UBE2A ubiquitin-conjugating enzyme E2A (RAD6 homolog) [Source:HGNC Symbol;Acc:12472] T 9723 SEMA3E sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E [Source:HGNC Symbol;Acc:10727] T 36 ACADSB acyl-CoA dehydrogenase, short/branched chain [Source:HGNC Symbol;Acc:91] T 9669 EIF5B eukaryotic translation initiation factor 5B [Source:HGNC Symbol;Acc:30793] P T 887 CCKBR cholecystokinin B receptor [Source:HGNC Symbol;Acc:1571] zzz999 6744 SSFA2 sperm specific antigen 2 [Source:HGNC Symbol;Acc:11319] P T 116 ADCYAP1 adenylate cyclase activating polypeptide 1 (pituitary) [Source:HGNC Symbol;Acc:241] T 861 RUNX1 runt-related transcription factor 1 [Source:HGNC Symbol;Acc:10471] P T 132 ADK adenosine kinase [Source:HGNC Symbol;Acc:257] P T 5284 PIGR polymeric immunoglobulin receptor [Source:HGNC Symbol;Acc:8968] T 100133941 zzz999 zzz999 T 9950 GOLGA5 golgin A5 [Source:HGNC Symbol;Acc:4428] zzz999 4040 LRP6 low density lipoprotein receptor-related protein 6 [Source:HGNC Symbol;Acc:6698] P T 10808 HSPH1 heat shock 105kDa/110kDa protein 1 [Source:HGNC Symbol;Acc:16969] zzz999 54434 SSH1 slingshot homolog 1 (Drosophila) [Source:HGNC Symbol;Acc:30579] T 5611 DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 [Source:HGNC Symbol;Acc:9439] zzz999 4001 LMNB1 lamin B1 [Source:HGNC Symbol;Acc:6637] T 79711 IPO4 importin 4 [Source:HGNC Symbol;Acc:19426] zzz999 57035 C1orf63 chromosome 1 open reading frame 63 [Source:HGNC Symbol;Acc:25234] zzz999 8346 HIST1H2BI histone cluster 1, H2bi [Source:HGNC Symbol;Acc:4756] zzz999 908 CCT6A chaperonin containing TCP1, subunit 6A (zeta 1) [Source:HGNC Symbol;Acc:1620] T 10787 NCKAP1 NCK-associated protein 1 [Source:HGNC Symbol;Acc:7666] T 4012 LNPEP leucyl/cystinyl aminopeptidase [Source:HGNC Symbol;Acc:6656] P T 9568 GABBR2 gamma-aminobutyric acid (GABA) B receptor, 2 [Source:HGNC Symbol;Acc:4507] P T 11214 AKAP13 A kinase (PRKA) anchor protein 13 [Source:HGNC Symbol;Acc:371] P T 26298 EHF ets homologous factor [Source:HGNC Symbol;Acc:3246] P T 55914 ERBB2IP erbb2 interacting protein [Source:HGNC Symbol;Acc:15842] P T 1997 ELF1 E74-like factor 1 (ets domain transcription factor) [Source:HGNC Symbol;Acc:3316] T 6364 CCL20 chemokine (C-C motif) ligand 20 [Source:HGNC Symbol;Acc:10619] zzz999 7425 VGF VGF nerve growth factor inducible [Source:HGNC Symbol;Acc:12684] zzz999 4880 NPPC natriuretic peptide C [Source:HGNC Symbol;Acc:7941] zzz999 3799 KIF5B kinesin family member 5B [Source:HGNC Symbol;Acc:6324] zzz999 55129 ANO10 anoctamin 10 [Source:HGNC Symbol;Acc:25519] zzz999 5825 ABCD3 ATP-binding cassette, sub-family D (ALD), member 3 [Source:HGNC Symbol;Acc:67] T 5257 PHKB phosphorylase kinase, beta [Source:HGNC Symbol;Acc:8927] T 8655 DYNLL1 dynein, light chain, LC8-type 1 [Source:HGNC Symbol;Acc:15476] zzz999 5111 PCNA proliferating cell nuclear antigen [Source:HGNC Symbol;Acc:8729] T 5925 RB1 retinoblastoma 1 [Source:HGNC Symbol;Acc:9884] T 3169 FOXA1 forkhead box A1 [Source:HGNC Symbol;Acc:5021] T 3626 INHBC inhibin, beta C [Source:HGNC Symbol;Acc:6068] zzz999 22807 IKZF2 IKAROS family zinc finger 2 (Helios) [Source:HGNC Symbol;Acc:13177] P T

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.